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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887410.1_cds_XP_016441777.1_37106
CDS Infomation

[gene=LOC107767324] [db_xref=GeneID:107767324] [protein=F-box-like/WD repeat-containing protein TBL1XR1] [protein_id=XP_016441777.1] [location=join(31148..31208,34663..34808,34900..35263,35412..35506,35751..35797,36958..37108,37260..37323,38325..38483,38596..38717,39149..39223,39822..39875,39980..40053,46970..47044,47383..47602)] [gbkey=CDS]
Sequence

ATGATCTCTATAACCTCCGCGGAGTTAAACTACCTCGTTTTCCGATACCTCCATGAATCA
GGATTCTCACACTCAGCCTTTGCTTTAGGATACGAGGGGGGGATGAATAAGAGCACAATA
GATGCAAATCTGGTCCCTCCAGGTGCTCTTGTTACCTTTGTGCAAAAGGGTATTCAGTAT
CTTGAACTGGAAGCAAATTTGAGCAATGATGATTCCGACATGGACGAAGACTTCCAGTTT
CTACAACCTTTGGATCTCATTACAAAGGATGTGTACGAGCTGCAAAAAATAATAAAAGAG
AAAAAGGAAAAGCTTCAGAAAGATAAACCTAGGGGGAAGGACAAGGTGAATGCTGACCAT
GTGAGGGACCATGAACAAGAACCTATAAAAGAAAGAGAGAGGGAAAAACAACAGAGGGAA
AAAGAGCGAGAACGGGATAGAGAAAGGATTGAAAAGAATAAGGAGAAAGAAAAGCGCAAA
GAAAAAGAAAAACCACGCAAGGATCTTATGGATTTGAAACGGAGTGGAGAAAAAGAGACT
ACCAGATGTGAAGAAAATGGAAAAGCTGGAGATTTGGAGCCTATGGAGATCTGCACAAGC
TCAACCTCCTTACCATGTGAAATTCCAAGTTGTGACGTAGTGGTTTTGGAAGGGCATACC
TCTGAGGTTTTTGTTTGTGCTTGGAGTCCAGAAGGGTCACTTCTTGCATCTGGGTCTGGA
GACTCTACTGCTAGAATTTGGACCATTGGAGATGGTCCATGTAATTCTACAATCCCAAGC
GCGCATCCAAATGTTGTGGTTTTGAAGCATTTCAAAAGTCAAGCAAATGAGAAAAGCAAG
GATGTCACAACACTTGATTGGAATGGCGAGGGTACCCTGCTTGCAACAGGTTCTTATGAT
GGCCAAGCCAGAATCTGGAACCGAGCTGGGGAATTGGTTAGTACTCTAAACAAACATAGA
GGGCCAATCTTCTCCTTGAAGTGGAACAAGAAAGGTGATTATCTCCTTAGCGGTAGTGTT
GATACAACTGCCATTGTTTGGGATGTGATGTCTGGCGAATGGAAACAGCAATTTGAATTT
CATTCAGGTCCCACGCTTGATGTTGATTGGCGAAACAATAGTTCTTTTGCAACCTGCTCC
ACTGATAACGTGATCCACGTCTGTAAAATTGGAGAGAATCGACCAGTCAAAACTTTCTCA
GGACATCAGAGTGAAGTCAATGCTATCAAGTGGGACCCCTCAGGTTTTTTGCTGGCTTCA
TGTTCTGATGATAACACAGCTAAGATATGGAGCACGAAACAGGATGGCTGCCTGCATGAT
TTCAGAGAACATGGCAAAGAGATATATACCATCAGATGGAGTCCAACTGGCCCTGGTACA
AGCAATCCGAATAAACAGTTGTTGCTGGCAAGTGCTTCATTTGACTCTACTGTGAAGCTA
TGGGATGTTGAACTAGGGCGTCTTCTTCACAGCTTGAACGGCCACAGGGATCCTGTCTAC
TCTGTTGCATTTAGTCCGAATGGTGAGTACTTGGCAAGTGGATCATTGGATAAATGCTTG
AATATATGGTCAGTGAAGGAGGCCAAGATTGTAAGAACTTACAATGGCGATGGCGGTATT
TTTGAAGTGTGTTGGGACAAGGAAGGCAACAAGGTTGCCGCTTGTTTTGCAAACAATGTG
GTTTGTGTCCTTGATATTCGAATGTAG

Peptide Sequence

PEP ID

XP_016441777.1
PEP Infomation

PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 [Nicotiana tabacum]
Sequence

MISITSAELNYLVFRYLHESGFSHSAFALGYEGGMNKSTIDANLVPPGALVTFVQKGIQY
LELEANLSNDDSDMDEDFQFLQPLDLITKDVYELQKIIKEKKEKLQKDKPRGKDKVNADH
VRDHEQEPIKEREREKQQREKERERDRERIEKNKEKEKRKEKEKPRKDLMDLKRSGEKET
TRCEENGKAGDLEPMEICTSSTSLPCEIPSCDVVVLEGHTSEVFVCAWSPEGSLLASGSG
DSTARIWTIGDGPCNSTIPSAHPNVVVLKHFKSQANEKSKDVTTLDWNGEGTLLATGSYD
GQARIWNRAGELVSTLNKHRGPIFSLKWNKKGDYLLSGSVDTTAIVWDVMSGEWKQQFEF
HSGPTLDVDWRNNSSFATCSTDNVIHVCKIGENRPVKTFSGHQSEVNAIKWDPSGFLLAS
CSDDNTAKIWSTKQDGCLHDFREHGKEIYTIRWSPTGPGTSNPNKQLLLASASFDSTVKL
WDVELGRLLHSLNGHRDPVYSVAFSPNGEYLASGSLDKCLNIWSVKEAKIVRTYNGDGGI
FEVCWDKEGNKVAACFANNVVCVLDIRM

Transcript Sequence

Gene sequence data has not been registered.